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| ID | Type | Description | Link |
|---|---|---|---|
| 2022-A02452-41 | Other Identifier | France : Ministry of Health |
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| Name | Class |
|---|---|
| Institut National de la Santé Et de la Recherche Médicale, France | OTHER_GOV |
| URC-CIC Paris Descartes Necker Cochin | OTHER |
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The single nucleus RNA-seq approach allows the placental transcriptome to be analyzed from nuclei, thus preserving the integrity of placental syncytium. This approach is feasible on small fragments of villi and offers for the first time the possibility to consider the characterization of gene expression within the structural unit of the human placenta during pregnancy (at the 1st trimester and childbirth)
Chorionic villus biopsies are routinely performed between 11SA and 15SA at the Fetal Medicine Unit́ of the Port-Royal Maternity Hospital (CPDPN Cochin) after the patient has signed an information and consent form for the genetic analysis.
The patient will be asked to participate to the VilliRNAseq project and will sign the consent form of the study. After the cytogeneticist observation, a villi fragment will be snap-frozen in liquid nitrogen and stored at -80°C until use. Each patient sampled in the first trimester is followed until the end of the pregnancy. At delivery, cesarean section or vaginal delivery, a placental sample will be snap-frozen in liquid nitrogen and stored at -80°C until use.
Isolation, sorting and encapsidation of nuclei, RNA libraries preparation and sequencing will be carried out using 10x Genomics technology. State-of-the-art computational analyses to decipher trajectories and cell-to-cell communications.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Villi RNASeq | There is only one study group : patients with placental transcriptomic analysis by single nucleus RNA-seq approach |
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| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| Non applicable | Other | Placental transcriptomic analysis |
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| Measure | Description | Time Frame |
|---|---|---|
| Analysis of the cellular transcriptomic trajectory of the human placenta | Sequencing data will be analysed at the Institut Cochin, cell trajectories will be modelled and intracellular communications will be inferred | Day 0 |
| Analysis of the cellular transcriptomic trajectory of the human placenta | Sequencing data will be analysed at the Institut Cochin, cell trajectories will be modelled and intracellular communications will be inferred | At childbirth |
| Measure | Description | Time Frame |
|---|---|---|
| Collection of placental samples | Day 0 | |
| Collection of placental samples | At childbirth | |
| Identification of early markers of pregnancy complications |
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Inclusion Criteria:
Exclusion Criteria:
Pregnancy
Women in their pregnancy follow-up at the Maternité Port-Royal-Cochin
| Name | Role | Phone | Extension | |
|---|---|---|---|---|
| Vassilis TSATSARIS, MD PHD | Contact | 00331 58 41 38 71 | vassilis.tsatsaris@aphp.fr | |
| Marie BENHAMMANI-GODARD | Contact | 0033158411190 | marie.godard@aphp.fr |
| Name | Affiliation | Role |
|---|---|---|
| Céline MÉHATS, PHD | Institut National de la Santé Et de la Recherche Médicale, France | Study Director |
| Hélène COLLINOT, MD | APHP | Principal Investigator |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Maternité Port-Royal, Cochin hospital | Recruiting | Paris | IDF | 75014 | France |
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| ID | Term |
|---|---|
| D011225 | Pre-Eclampsia |
| ID | Term |
|---|---|
| D046110 | Hypertension, Pregnancy-Induced |
| D011248 | Pregnancy Complications |
| D005261 | Female Urogenital Diseases and Pregnancy Complications |
| D000091642 | Urogenital Diseases |
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Placental tissue
Pre-eclampsia, growth retardation in utero, delivery before 37 SA |
| Until at Childbirth |