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| Name | Class |
|---|---|
| Dr Cipto Mangunkusumo General Hospital | OTHER |
| Fondazione Policlinico Universitario Agostino Gemelli IRCCS | OTHER |
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Pseudomonas aeruginosa causes severe infections in hospitalized patients. The worldwide emergence of carbapenem-resistant P. aeruginosa (CRPA) makes infections by these pathogens almost untreatable. The World Health Organization now ranks CRPA highest in the list of 'urgent threats'. Information for action to prevent further emergence has to come from insight into sources and transmission routes through smart surveillance. At present, a smart surveillance strategy is not available for CRPA. The aim of this project is to develop a globally-applicable smart surveillance strategy to guide action against the spread of CRPA. Since P. aeruginosa prefers moist niches, we will focus on the human-water interface. First, highly-sensitive methods to detect CRPA in specific environmental and human niches will be developed. Subsequently, CRPA will be collected in three study sites with increasing prevalences of CRPA, increasingly warmer climates, and different water situations: Rotterdam (The Netherlands), Rome (Italy), Jakarta (Indonesia). CRPA will be searched for in a variety of niches in the environment outside and inside the hospital, and in healthy humans and hospitalized patients. Whole genome sequencing will be performed to compare the CRPA from different sources and identify transmission routes. Our project will provide insight into the relative contribution of the different potential reservoirs of CRPA to its spread in different settings which will be used for the development of a globally-applicable surveillance strategy for CRPA to guide preventive actions.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Patients at the moment of their admission to the hospital in one of the three cities | Swabs will be taken from patients who are willing to participate. | ||
| Healthy volunteers living in "high-risk areas" in one of the three cities. | Swabs will be taken from healthy volunteers who are willing to participate. |
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| Measure | Description | Time Frame |
|---|---|---|
| Prevalence of CRPA carriage in healthy individuals and newly hospitalized patients, CRPA prevalence in wet hospital environments, CRPA concentrations in aquatic environments, and the frequency and transmission likelihood within epidemiological clusters | 2022/2024 |
| Measure | Description | Time Frame |
|---|---|---|
| Prevalence of body site-specific CRPA carriage in healthy individuals and newly hospitalized patients, prevalence of clinical CRPA isolates, and prevalence and geographic distribution of carbapenemase genes. | 2022/2024 |
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Inclusion Criteria healthy individuals:
Exclusion Criteria healthy individuals:
Inclusion Criteria patients:
Exclusion Criteria patients:
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Healthy volunteers are individuals living in "high-risk areas" in one of the three cities. "High-risk areas" are areas that we expect to have a high prevalence of CRPA which may affect humans.
Patients will be included within 48 hours of their admission to the hospital (non-critical medical and surgical wards) in one of the three cities. The three participating hospitals are all university hospitals.
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| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Dr Cipto Mangunkusumo General Hospital | Jakarta | Indonesia | ||||
| Fondazione Policlinico Universitario Agostino Gemelli IRCCS |
| PubMed Identifier | Type | Citation | Retractions |
|---|---|---|---|
| Background | Shahab et al. Development of a highly-sensitive method to detect the carriage of carbapenem-resistant Pseudomonas aeruginosa in humans. https://doi.org/10.1101/2024.08.27.609846 | ||
| 41581609 | Background | van Veen A, Rijfkogel A, Voor In 't Holt AF, Zandijk WHA, Vos MC, Klaassen CHW, Severin JA. Two-round point-prevalence study unveils shared blaVIM-2 integrons and spread of a blaIMP-15-encoding plasmid among carbapenem-resistant non-aeruginosa Pseudomonas species in the wet hospital environment. J Hosp Infect. 2026 Apr;170:25-33. doi: 10.1016/j.jhin.2026.01.003. Epub 2026 Jan 23. | |
| 39787647 |
| Label | URL |
|---|---|
| Related Info | View source |
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Metadata for human, hospital environment, and water data are available through the data repository DataverseNL (https://doi.org/10.34894/1OFFVG). Raw reads, assembly data and metadata are available on the International Pseudomonas Consortium Database (https://ipcd.ibis.ulaval.ca/). Deidentified individual participant data and data from environmental, including water, sources that underlie the results reported in this Article can be shared with researchers following submission of a methodologically sound proposal, approval by the SAMPAN Project Board, and can only be made available upon signing a Data Transfer Agreement. Proposals should be directed to the corresponding author or the corresponding author's department (projectmanagement.mmiz@erasmusmc.nl).
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| ID | Term |
|---|---|
| D011552 | Pseudomonas Infections |
| D058345 | Asymptomatic Infections |
| D003428 | Cross Infection |
| ID | Term |
|---|---|
| D016905 | Gram-Negative Bacterial Infections |
| D001424 | Bacterial Infections |
| D001423 | Bacterial Infections and Mycoses |
| D007239 | Infections |
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CRPA isolates will be collected and retained.
| Roma |
| Italy |
| Erasmus Medical Center | Rotterdam | South Holland | 3015 GD | Netherlands |
| Background |
| Shahab SN, van Veen A, Kemper MA, Rijfkogel A, Vos MC, Karuniawati A, Severin JA, Schmitt H; SAMPAN Consortium. Detection methods for carbapenem-resistant Pseudomonas aeruginosa in surface water and wastewater. Sci Total Environ. 2025 Jan 20;961:178086. doi: 10.1016/j.scitotenv.2024.178086. Epub 2025 Jan 8. |
| 39858379 | Background | van Veen A, Shahab SN, Rijfkogel A, Voor In 't Holt AF, Klaassen CHW, Vos MC, Saharman YR, Karuniawati A, Zelli S, De Lorenzis D, Menchinelli G, De Angelis G, Sanguinetti M, Kemper M, de Jong AEE, Mohammadi S, Renaud V, Kukavica-Ibrulj I, Potvin M, Nguyen GQ, Gauthier J, Levesque RC, Schmitt H, Severin JA. Sources and Transmission Routes of Carbapenem-Resistant Pseudomonas aeruginosa: Study Design and Methodology of the SAMPAN Study. Antibiotics (Basel). 2025 Jan 15;14(1):94. doi: 10.3390/antibiotics14010094. |
| 40691185 | Result | van Veen A, Shahab SN, Rijfkogel A, Vos MC, Saharman YR, Karuniawati A, Zelli S, De Lorenzis D, Menchinelli G, De Angelis G, Sanguinetti M, Voor In 't Holt AF, Severin JA; SAMPAN Consortium. Pseudomonas aeruginosa carriage and associated risk factors in healthy individuals and patients from Rotterdam, Rome, and Jakarta. Sci Rep. 2025 Jul 21;15(1):26392. doi: 10.1038/s41598-025-10175-y. |
| D058070 | Asymptomatic Diseases |
| D020969 | Disease Attributes |
| D010335 | Pathologic Processes |
| D013568 | Pathological Conditions, Signs and Symptoms |
| D007049 | Iatrogenic Disease |