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| Name | Class |
|---|---|
| Technological Innovations for Detection and Diagnosis Laboratory | UNKNOWN |
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In order to control the COVID-19 pandemic, a policy for the diagnosis and screening of people likely to be infected with SARS-CoV-2 has been established The reference diagnostic test is RT-PCR on nasopharyngeal swab. Nasopharyngeal swabbing requires training, generates a risk of aerosolization and therefore viral transmission to the operator, and is unpleasant or even painful for the patient. RT-PCR is efficient, but time-consuming. It is therefore necessary to consider techniques that are less subject to difficulties of production and sampling, and less time-consuming. Tandem mass spectrometry on saliva samples is a promising option. A combined "mass spectrometry/saliva test" should provide faster results.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Patients with SARS-CoV-2 infection |
| ||
| Patients without SARS-CoV-2 infection |
|
| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| Nasopharyngeal sampling | Diagnostic Test | Swabs will be taken of nasopharyngeal samples for RT-PCR |
|
| Measure | Description | Time Frame |
|---|---|---|
| Detection of SARS-CoV-2 on nasopharyngeal samples (gold standard) | RT-PCR | Day 0 |
| Detection of SARS-CoV-2 on a saliva samples by mass spectrometry | tandem mass spectrometry test | Day 0 |
| Measure | Description | Time Frame |
|---|---|---|
| Detection of SARS-CoV-2 on saliva samples via RT-PCR | RT-PCR | Day 0 |
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Inclusion Criteria:
Exclusion Criteria:
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Adults presenting to the Walk-in Center for Emerging Biological Risks of the Nîmes University Hospital for screening for SARS-CoV-2 infection or who are hospitalized at the Infectious and Tropical Diseases Department for severe infection with SARS-CoV-2.
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| Name | Affiliation | Role |
|---|---|---|
| Albert Sotto | Centre Hospitalier Universitaire de Nīmes | Principal Investigator |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| CHU de Nîmes | Nîmes | France |
| PubMed Identifier | Type | Citation | Retractions |
|---|---|---|---|
| 32697082 | Background | Gouveia D, Miotello G, Gallais F, Gaillard JC, Debroas S, Bellanger L, Lavigne JP, Sotto A, Grenga L, Pible O, Armengaud J. Proteotyping SARS-CoV-2 Virus from Nasopharyngeal Swabs: A Proof-of-Concept Focused on a 3 Min Mass Spectrometry Window. J Proteome Res. 2020 Nov 6;19(11):4407-4416. doi: 10.1021/acs.jproteome.0c00535. Epub 2020 Aug 5. |
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| ID | Term |
|---|---|
| D000086382 | COVID-19 |
| ID | Term |
|---|---|
| D011024 | Pneumonia, Viral |
| D011014 | Pneumonia |
| D012141 | Respiratory Tract Infections |
| D007239 | Infections |
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Anonymized saliva samples of patients with positive RT-PCR results.
| Saliva sampling | Diagnostic Test | A 10ml saliva sample will collected in a sterile 60ml bottle for mass spectrometry and RT-PCR |
|
| D014777 |
| Virus Diseases |
| D018352 | Coronavirus Infections |
| D003333 | Coronaviridae Infections |
| D030341 | Nidovirales Infections |
| D012327 | RNA Virus Infections |
| D008171 | Lung Diseases |
| D012140 | Respiratory Tract Diseases |