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| ID | Type | Description | Link |
|---|---|---|---|
| COG-AOST10B3 | Other Identifier | Children's Oncology Group | |
| CDR0000665327 | Other Identifier | Clinical Trials.gov | |
| NCI-2011-02210 | Registry Identifier | CTRP (Clinical Trial Reporting Program) |
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| Name | Class |
|---|---|
| National Cancer Institute (NCI) | NIH |
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RATIONALE: Studying samples of tumor tissue and blood from patients with cancer in the laboratory may help doctors learn more about changes that occur in DNA and identify biomarkers related to cancer.
PURPOSE: This research study is looking at DNA in tumor tissue samples from patients with localized or metastatic osteosarcoma.
OBJECTIVES:
OUTLINE: DNA and RNA from banked tumor tissue samples and DNA from paired blood samples are analyzed in sequencing studies using next-generation sequencing technology. The sequencing data from these tumor samples are matched to the Human RefSeq (for transcriptome sequencing) and normal human genome in the public databases and to the patient's germ line sequence to identify constitutional and somatic mutations.
Clinical information that is associated with each sample (i.e., age, tumor site, size, primary metastases, response to chemotherapy, surgical remission, follow-up time, and treatment protocol) is also collected, if available.
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| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| DNA analysis | Genetic | |||
| RNA analysis | Genetic | |||
| gene expression analysis | Genetic | |||
| gene rearrangement analysis | Genetic | |||
| mutation analysis | Genetic | |||
| laboratory biomarker analysis | Other |
| Measure | Description | Time Frame |
|---|---|---|
| Genomic expression profile in osteosarcoma tumor samples using transcriptome sequencing | ||
| Identification of activating and loss of function mutations and gene rearrangement using transcriptome sequencing | ||
| Mutations associated with outcome | ||
| Mutations also found in germ line DNA that predispose the patient to osteosarcoma |
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DISEASE CHARACTERISTICS:
PATIENT CHARACTERISTICS:
PRIOR CONCURRENT THERAPY:
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Diagnosis of localized or metastatic osteosarcoma
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| Name | Affiliation | Role |
|---|---|---|
| Javed Khan, MD | NCI - Oncogenomics Section | Principal Investigator |
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| ID | Term |
|---|---|
| D012509 | Sarcoma |
| D012516 | Osteosarcoma |
| ID | Term |
|---|---|
| D018204 | Neoplasms, Connective and Soft Tissue |
| D009370 | Neoplasms by Histologic Type |
| D009369 | Neoplasms |
| D018213 | Neoplasms, Bone Tissue |
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| ID | Term |
|---|---|
| D020869 | Gene Expression Profiling |
| D015321 | Gene Rearrangement |
| ID | Term |
|---|---|
| D005821 | Genetic Techniques |
| D008919 | Investigative Techniques |
| D055614 | Genetic Phenomena |
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Tumor Tissue
| D009372 | Neoplasms, Connective Tissue |