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| ID | Type | Description | Link |
|---|---|---|---|
| AMLAS2025 | Other Identifier | University of Milan-Bicocca |
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| Name | Class |
|---|---|
| IRCCS Istituto Ortopedico Rizzoli di Bologna | UNKNOWN |
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Application of computational statistics and machine learning methods to data derived from electronic health records of patients diagnosed with sarcoma.
This observational, retrospective, multicenter study will be conducted on a group of patients treated at the Rizzoli Orthopedic Institute in Bologna and followed throughout their treatment. The study population includes patients of both sexes and all ages, affected by the two types of bone sarcoma typical of young people, with histologically confirmed diagnoses. The musculoskeletal tumors referred to in the study are osteosarcoma (OS) and Ewing's sarcoma (ES). Both are rare and very aggressive tumors, with a prognosis that remains unsatisfactory. These characteristics limit the possibility of conducting ad hoc studies on large case series that would allow the characterization of patients affected by these conditions in order to identify prognostic predictors. The clinical registries of specialized centers such as the Rizzoli Orthopedic Institute (IOR), which has always been a reference point for the diagnosis and treatment of sarcomas, are a source of very relevant data in this regard, allowing the collection of observational data gathered prospectively over time. The aim of this retrospective observational study is to characterize clusters of patients with different prognostic profiles and, secondarily, to identify the most predictive characteristics with respect to the prognosis of patients, applying computational intelligence algorithms using the open-source programming language R to already available data.
At the Simple Departmental Structure (SSD) of Anatomy and Pathological Histology of the Rizzoli Orthopaedic Institute (IOR), two datasets containing these variables are available and ready for use:
Following ethical approval, access to these data will be requested, to be subsequently analyzed with computational intelligence algorithms (e.g., Random Forests) to determine the characteristics most predictive of prognosis (using a technique called "recursive feature elimination").
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Osteosarcoma | Data of patients diagnosed with osteosarcoma |
| |
| Ewing sarcoma | Data of patients diagnosed with Ewing sarcoma |
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| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| No intervention studied | Other | No intervention studied |
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| Measure | Description | Time Frame |
|---|---|---|
| Survival | Survival of patients during the follow-up | 6 months |
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Inclusion criteria: confirmed diagnosis of osteosarcoma or Ewing sarcoma between 2003 and 2012 at the IRCCS Rizzoli Orthopaedic Institute.
Exclusion criteria: diagnosis other than osteosarcoma or Ewing sarcoma and/or diagnosis made before 2003 and after 2012.
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Information unavailable.
| PubMed Identifier | Type | Citation | Retractions |
|---|---|---|---|
| 33816808 | Background | Fernandes K, Chicco D, Cardoso JS, Fernandes J. Supervised deep learning embeddings for the prediction of cervical cancer diagnosis. PeerJ Comput Sci. 2018 May 14;4:e154. doi: 10.7717/peerj-cs.154. eCollection 2018. | |
| 33504243 | Background | Chicco D, Oneto L. Computational intelligence identifies alkaline phosphatase (ALP), alpha-fetoprotein (AFP), and hemoglobin levels as most predictive survival factors for hepatocellular carcinoma. Health Informatics J. 2021 Jan-Mar;27(1):1460458220984205. doi: 10.1177/1460458220984205. |
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If we have the authorization from the Ethical Committee of the IOR hospital, we might consider sharing the data in the future.
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| ID | Term |
|---|---|
| D012509 | Sarcoma |
| D012516 | Osteosarcoma |
| D012512 | Sarcoma, Ewing |
| ID | Term |
|---|---|
| D018204 | Neoplasms, Connective and Soft Tissue |
| D009370 | Neoplasms by Histologic Type |
| D009369 | Neoplasms |
| D018213 | Neoplasms, Bone Tissue |
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| 37708628 | Background | Chicco D, Haupt R, Garaventa A, Uva P, Luksch R, Cangelosi D. Computational intelligence analysis of high-risk neuroblastoma patient health records reveals time to maximum response as one of the most relevant factors for outcome prediction. Eur J Cancer. 2023 Nov;193:113291. doi: 10.1016/j.ejca.2023.113291. Epub 2023 Aug 19. |
| 38273986 | Background | Cerono G, Melaiu O, Chicco D. Clinical Feature Ranking Based on Ensemble Machine Learning Reveals Top Survival Factors for Glioblastoma Multiforme. J Healthc Inform Res. 2023 Sep 20;8(1):1-18. doi: 10.1007/s41666-023-00138-1. eCollection 2024 Mar. |
| 40506780 | Background | Chicco D, Oneto L, Cangelosi D. DBSCAN and DBCV application to open medical records heterogeneous data for identifying clinically significant clusters of patients with neuroblastoma. BioData Min. 2025 Jun 12;18(1):40. doi: 10.1186/s13040-025-00455-8. |
| D009372 | Neoplasms, Connective Tissue |