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| Name | Class |
|---|---|
| Nanjing Simcere Medical Laboratory Science Co., Ltd. | UNKNOWN |
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This is a prospective case-control study, aiming at developing a cell free DNA (cfDNA) multi-omics precise diagnostic model for screening of pancreatic cancer.
Peripheral blood samples from participants with new diagnosis of pancreatic cancers, precancerous lesions and healthy individuals will be collected to characterize the cancer-specific signatures by low-pass whole-genome sequencing and target methylation sequencing using cfDNA. An ensemble multi-omics model will be trained aided by machine learning algorithm and validated in test set. The performance of this multi-omics model distinguishing pancreatic cancer from non-cancer will be evaluated.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Cancer arm | Participants with new diagnosis of pancreatic cancer. |
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| Precancerous lesions arm | Participants with precancerous lesions. |
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| Healthy individuals arm | Healthy individuals without findings of clinical significance during routine health checkups. |
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| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| A noninvasive cfDNA multi-omics assay | Diagnostic Test | Peripheral venous blood samples will be collected from pancreatic cancer patients, individuals with precancerous lesions, and healthy controls. Subsequently, cfDNA will be extracted and subjected to low-pass whole genome sequencing (LP-WGS) and hybrid capture-based targeted methylation sequencing (TMS). |
| Measure | Description | Time Frame |
|---|---|---|
| Performance of cfDNA multi-omics model for discriminating pancreatic cancer versus healthy individuals. | The area under the curve (AUC), sensitivity and specificity of cfDNA multi-omics model. | 12 months |
| Measure | Description | Time Frame |
|---|---|---|
| Performance of cfDNA multi-omics model for discriminating patients with pancreatic cancer and precancerous lesions versus healthy individuals. | Sensitivity of cfDNA multi-omics model at specificity of 95% for discriminating patients with pancreatic cancer and precancerous lesions versus healthy individuals. | 12 months |
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Cancer Arm
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Exclusion Criteria:
Precancerous Lesions Arm
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Healthy Individuals Arm
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Patients diagnosed pancreatic cancer or precancerous lesions and healthy individuals.
| Name | Role | Phone | Extension | |
|---|---|---|---|---|
| Xian-Jun Yu, M.D., Ph.D. | Contact | +86-21-64175590 | yuxianjun@fudanpci.org |
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| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Department of Pancreatic and Hepatobiliary Surgery, Fudan University Shanghai Cancer Center; Pancreatic Cancer Institute, Fudan University; 270 Dong An Road, Shanghai 200032, China | Recruiting | Shanghai | Shanghai Municipality | 200032 |
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| ID | Term |
|---|---|
| D010190 | Pancreatic Neoplasms |
| ID | Term |
|---|---|
| D004067 | Digestive System Neoplasms |
| D009371 | Neoplasms by Site |
| D009369 | Neoplasms |
| D004701 | Endocrine Gland Neoplasms |
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| Performance of cfDNA multi-omics model for discriminating precancerous lesions versus healthy individuals. |
Sensitivity of cfDNA multi-omics model for discriminating precancerous lesions versus healthy individuals. |
| 12 months |
| Performance of pre-defined model in clinical sub-groups of interest. | Sensitivity of cfDNA multi-omics model for pancreatic cancer at different stages or in different pathological subtypes. | 12 months |
| China |
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| D004066 |
| Digestive System Diseases |
| D010182 | Pancreatic Diseases |
| D004700 | Endocrine System Diseases |