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| Name | Class |
|---|---|
| Immunexpress | INDUSTRY |
GEODESIC is a prospective descriptive cohort investigation that will examine the generalizability of the novel host gene expression biomarkers, SeptiCyteTM LAB, SeptiCyteTM VIRUS, SeptiCyteTM BACT, and SeptiCyteTM TRIAGE (collectively 18 genes or SeptiCyteTM LVBT) and SeptiCyteTM RAPID, for differentiating children with bacterial sepsis, versus severe viral illness, versus non-infectious related systemic inflammatory response syndrome.
Specific Aim 1. Validate the robustness of the SeptiCyteTM LVBT gene expression signatures for providing clear discrimination between critically ill children with bacterial sepsis versus severe viral illness versus infection-negative systemic inflammation (INSI) secondary to a variety of etiologies.
Approach: We will expand our previous Genotypes And Phenotypes in Pediatric SIRS and Sepsis (GAPPSS) INSI cohort to children with recent trauma, thermal burns, anoxic-ischemic reperfusion events, exposure to cardiopulmonary bypass, extracorporeal life support, or dialytic therapy, CAR-T cell therapy, and various rheumatologic diagnoses. e we will recruit children with bacterial and viral infection who demonstrate a spectrum of illness severity and organ dysfunction. This specific aim will demonstrate the generalizability of SeptiCyteTM LVBT among critically children with life-threatening infectious disease or INSI.
Specific Aim 2. Determine if SeptiCyteTM LVBT gene expression signatures trend towards resolution of previously induced or suppressed gene expression states as critical illness resolves.
Approach: We will obtain paired blood samples for SeptiCyteTM LVBT gene expression, the first around the time of intensive care unit (ICU) admission (critically ill) and the second at ICU discharge approximately 48 hours later (transition to acute care). Resolution of critical illness will be quantified by serial daily measures of composite organ dysfunction.
Specific Aim 3. Ascertain that performance of SeptiCyteTM RAPID utilizing a point of care device at Seattle Children's will be equivalent to centralized assessment using SeptiCyteTM LAB.
Approach: Blood samples will be processed on site (Seattle Children's) for SeptiCyte RAPID testing. SeptiCyteTM RAPID is the result of the translation of the SeptiCyteTM LAB test to the cartridge-based Biocartis Idyllaâ„¢ platform.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Suspected/documented bacterial sepsis | Patients have evidence of an acute bacterial infection with organ dysfunction |
| |
| Suspected/documented viral sepsis | Patients have evidence of an acute viral infection with organ dysfunction |
| |
| Infection negative systemic inflammation (SIRS) | Patients have no active infection but exhibit SIRS |
|
| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| SeptiCyte (various) | Diagnostic Test | mRNA expression scores |
|
| Measure | Description | Time Frame |
|---|---|---|
| mRNA expression | SeptiCyte (various) gene expression scores | At PICU admission and 48 hours later |
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Inclusion Criteria:
INSI Cohort
Pediatric Bacterial Sepsis Cohort
Pediatric Bacterial Sepsis Cohort
Exclusion Criteria:
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Critically ill children with systemic inflammatory response secondary to bacterial or viral sepsis or non-infectious SIRS
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| Name | Affiliation | Role |
|---|---|---|
| Jerry J Zimmerman, MD, PhD | Seattle Children's Research Center | Principal Investigator |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Seattle Children's Hospital, Harborview Medical Center | Seattle | Washington | 98105 | United States | ||
| Seattle Children's Hospital |
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| ID | Term |
|---|---|
| D018805 | Sepsis |
| ID | Term |
|---|---|
| D007239 | Infections |
| D018746 | Systemic Inflammatory Response Syndrome |
| D007249 | Inflammation |
| D010335 | Pathologic Processes |
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Paired blood samples for paired mRNA expression analysis, the first around the time of PICU admission and the second around 48 hours later
| Seattle |
| Washington |
| 98105 |
| United States |
| D013568 |
| Pathological Conditions, Signs and Symptoms |