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The intestinal epithelial barrier is one of the most important security checkpoints of our body that constrains harmful factors from invading mucosal surfaces and facilitates the absorption of nutrients and water. Its correct functioning is essential for maintaining gut tissue homeostasis and proper immunity. However, such an equilibrium may be interrupted, resulting in an uncontrolled entrance of pathogenic stimuli that in turn activate a persistent gut immune response, with detrimental consequences for both local and systemic immunity. Alterations in the composition and functionality of the gut microbiome seem to be a central factor in affecting gut barrier integrity thus influencing intestinal permeability. The microbiome composition is impacted by dietary habits and environmental pollution and conditions, hygiene, genetic asset, and physical activity, which could interact in concert leading to dysbiosis, thereby influencing the immune response through the production of several metabolites. Chronic inflammatory diseases, including ulcerative colitis (UC) and type 1 diabetes (T1D), share microbiota dysbiosis, among pathologic characteristics, that may arise, be provoked, or be exacerbated because of barrier leakage. Therefore, these two chronic diseases may be considered prototype pathologies where the intrinsic connection between intestinal dysbiosis and the barrier leakage impact each other during the pathogenesis.
This is an observational multicentre study performed on patients with an established diagnosis of UC (according to the standard classification) and patients with new-onset type 1 diabetes (T1D) which aims to identify environmental and genetic factors contributing to chronic inflammation within the intestine and in peripheral organs by taking advantage of Internet-Of things (IoT) technologies (web app) and machine learning approaches. During the colonoscopy procedure planned for patients with UC following the routine surveillance according to the normal clinical practice (0 and 12 months), the gastroenterologist will collect 8 additional biopsies; furthermore, blood samples and stools for UC patients and blood samples, stools, and urines for T1D patients will be collected at baseline and during the routine surveillance according to the normal clinical practice (0, 6, and 12 months) and stored for the following analysis. For T1D patients, blood, urine and stool sample collection are not planned for the normal clinical practice, but will be performed specifically for this research proposal at different points during the normal clinical practice clinical visit: baseline, after 6 months and after 12 months.
For UC patients, blood and biopsies are collected during the procedures already planned for normal clinical practice during clinical surveillance. The investigators will take advantage of this standard of-care procedures to collect an additional volume of blood (at baseline, after 6 months and after 12 months). Therefore, patients expressing their voluntary participation in the study will be asked to give fecal samples during the routine-surveillance visit (as per the normal clinical practice) at different: at baseline, after 6 months and after 12 months.
Ospedale San Raffaele (OSR - Operative Unit (UO)1 (UO1)) is the promoter of this study. The other centers participating in the study are:
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Ulcerative Colitis (UC) | Patients will be enrolled in all the centers participating in this study: Ospedale San Raffaele - Milano, Ospedale Casa Sollievo della Sofferenza - Foggia and Azienda Ospedaliera San Camillo Forlanini - Roma as follows: 100 UC patients at OSR, 75 at San Camillo Hospital and 75 at CSS |
| |
| Diabetes Type 1 (T1D) | 50 new onset T1D patients recruited and enrolled at OSR |
|
| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| Environmental factor monitoring; collection of blood, feces and urine. For UC: collection of 8 additional biopsies | Other | During the routine surveillance according to the normal clinical practice, blood samples, feces and urines will be collected from UC patients and T1D patients (0, 6, and 12 months). Moreover, for UC patients during the surveillance sigmoidoscopy according to the normal clinical practice (or colonoscopy if the patient has more than 8 years; at the enrollment and after 12 months), colonic biopsies will be collected |
| Measure | Description | Time Frame |
|---|---|---|
| To identify the factors contributing to chronic inflammation within the intestine and in peripheral organs, in particular focusing on blood markers | Evaluation of the mmune response profile: measurement of the percentage of different immune cell populations | 1-18 months |
| To identify the factors contributing to chronic inflammation within the intestine and in peripheral organs, in particular focusing on feces markers | Evaluation of microbial composition of the gut: identification and quantification of different microbial species colonizing the gut | 1-18 months |
| To identify the factors contributing to chronic inflammation within the intestine and in peripheral organs, in particular focusing on biopsies markers | RNA extraction and transcriptomics to identify molecular variation | 1-18 months |
| Measure | Description | Time Frame |
|---|---|---|
| Taking advantage of the measurements collected in Outcome 1, the investigators will use a machine learning-based multi-omics approach to easily recognize patient differences, stratification and characterization | Using MOFA, a machine learning based bioinformatics tool that comprehensively and simultaneously analyzes multiple omics and patient-specific data recorded during the follow up, the investigators could identify the origin of different clinical outcomes during the disease course, ultimately stratifying them based on environmental factors to which they were exposed and their molecular and genetic characteristics. |
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Inclusion Criteria:
UC:
T1D:
Exclusion Criteria:
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The population that will be recruited for the finalization of this study will be composed of 300 patients (250 patients with UC and 50 patients with T1D) under routine surveillance according to the normal clinical practice.
Please a note for the Age Limits (Above): there are different age limits depending on the group:
UC: > 18 years T1D: between 7 and 17 years
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| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| IRCCS Ospedale San Raffaele | Milan | Italy |
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|
| 19-24 months |
| ID | Term |
|---|---|
| D003922 | Diabetes Mellitus, Type 1 |
| D003093 | Colitis, Ulcerative |
| ID | Term |
|---|---|
| D003920 | Diabetes Mellitus |
| D044882 | Glucose Metabolism Disorders |
| D008659 | Metabolic Diseases |
| D009750 | Nutritional and Metabolic Diseases |
| D004700 | Endocrine System Diseases |
| D001327 | Autoimmune Diseases |
| D007154 | Immune System Diseases |
| D003092 | Colitis |
| D005759 | Gastroenteritis |
| D005767 | Gastrointestinal Diseases |
| D004066 | Digestive System Diseases |
| D015212 | Inflammatory Bowel Diseases |
| D003108 | Colonic Diseases |
| D007410 | Intestinal Diseases |
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| ID | Term |
|---|---|
| D003672 | Defecation |
| D014554 | Urination |
| ID | Term |
|---|---|
| D004068 | Digestive System Physiological Phenomena |
| D055688 | Digestive System and Oral Physiological Phenomena |
| D014553 | Urinary Tract Physiological Phenomena |
| D012101 | Reproductive and Urinary Physiological Phenomena |
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