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| Name | Class |
|---|---|
| National Taiwan University Hospital | OTHER |
| Mackay Memorial Hospital | OTHER |
| National Cheng-Kung University Hospital | OTHER |
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This project will clarify the potential interaction between HBV infection and steatosis, and their impact on genetic alterations and tumor immune microenvironment.
This study will start with a "training cohort" of the NTUH and NTU Cancer Center patients, consisting of 4 sub-groups: HBV (+) steatosis (+), HBV (-) steatosis (+), HBV (+) steatosis (-) and HBV (-) steatosis (-). HBV (+) is defined as either: (a) HBsAg (+) or (b) HBsAg (-) anti-HBc (+) and HBV DNA detectable in blood or tumor tissue. Steatosis is defined by histology. We will enroll 400 patients who had sufficient tissue for testing in the training cohort. The following studies will be performed: (1) NGS of targeted genes panel using the National Health Research Institutes precision medicine platform; (2) transcriptomic analysis of immune microenvironment using RNA-seq and multiplex immunofluorescence staining; (3) lipotoxic genotyping for SNPs; (4) clinical outcomes of MAFLD vs. non-MAFLD. The genetic and immunological features will be further tested by a "validation cohort", from collaborative hospitals. This project will clarify the potential interaction between HBV infection and steatosis, and their impact on genetic alterations and tumor immune microenvironment.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| training cohort | Consisting of 4 sub-groups: HBV (+) steatosis (+), HBV (-) steatosis (+), HBV (+) steatosis (-) and HBV (-) steatosis (-). HBV (+) is defined as either: (a) HBsAg (+) or (b) HBsAg (-) anti-HBc (+) and HBV DNA detectable in blood or tumor tissue. Steatosis is defined by histology. We will enroll 400 patients who had sufficient tissue for testing in the training cohort. | ||
| validation cohort | For the validation cohort, the clinical and pathological information will be obtained retrospectively by TCOG and will take 6 months to identify eligible patients for the 4 sub-groups listed above. |
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| Measure | Description | Time Frame |
|---|---|---|
| transcriptomic analysis of immune microenvironment | using RNA-seq and multiplex immunofluorescence staining | 2 Years |
| lipotoxic genotyping for SNPs | lipotoxic genotyping for SNPs | 2 years |
| clinical outcomes of MAFLD vs. non-MAFLD. | clinical outcomes of MAFLD vs. non-MAFLD. | 2 years |
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Inclusion Criteria:
Exclusion Criteria:
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hepatocellular carcinoma patients
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| Name | Affiliation | Role |
|---|---|---|
| Tsang-Wu Liu | Taiwan Cooperative Oncology Group, NHRI | Study Director |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| National Cheng-Kung University Hospital | Tainan | Taiwan | ||||
| National Taiwan University Hospital |
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| ID | Term |
|---|---|
| D006528 | Carcinoma, Hepatocellular |
| ID | Term |
|---|---|
| D000230 | Adenocarcinoma |
| D002277 | Carcinoma |
| D009375 | Neoplasms, Glandular and Epithelial |
| D009370 | Neoplasms by Histologic Type |
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next-generation sequencing
| Taipei |
| 100 |
| Taiwan |
| Mackay Memorial Hospital | Taipei | Taiwan |
| National Taiwan University Cancer Center | Taipei | Taiwan |
| D009369 | Neoplasms |
| D008113 | Liver Neoplasms |
| D004067 | Digestive System Neoplasms |
| D009371 | Neoplasms by Site |
| D004066 | Digestive System Diseases |
| D008107 | Liver Diseases |