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| ID | Type | Description | Link |
|---|---|---|---|
| 2022-A01441-42 | Other Identifier | ID-RCB number, ANSM |
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| Name | Class |
|---|---|
| Groupement Interrégional de Recherche Clinique et d'Innovation | OTHER |
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Some limb malformations are known to be sporadic (non hereditary). For these malformations, no molecular cause was identified, even after whole genome sequencing. Methylation of CpG islands is an epigenetic process which is usually not transmitted to the descents. We hypothesize that sporadic limb malformations may be due to a methylation anomaly. This study will include patients with Amelia or Femur Fibula Ulna Syndrome. With patients consent, we will study the methylome on DNA samples already available in our laboratory. Each patient sample will be paired to a control of same tissue, age and sex. By bioinformatics comparison, we will identify differentially methylated candidate regions.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Patients with amelia | Patients with severe hypoplasia or agenesia of at least two limbs who gave their consent for the research and for whom a DNA sample is available in our laboratory |
| |
| Patients with Femur-Fibula-Ulna Syndrome | Patients with anomaly of at least one femur, one fibula and with oligodactyly who gave their consent for the research and for whom a DNA sample is available in our laboratory. |
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| Healthy subjects | Healthy subjects used as controls, who gave their consent for the research and for whom a DNA sample is available in our laboratory. |
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| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| Methylome | Other | Epigenetic study : analysis of DNA methylation |
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| Measure | Description | Time Frame |
|---|---|---|
| Differentially Methylated Regions | through study completion an average of 3 years |
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Inclusion Criteria:
Exclusion Criteria:
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DNA samples were obtained from the molecular biology laboratory of Lille university hospital. All patients exhibiting amelia or Femur-Fibula-Ulna Syndrome and with enough DNA available in the lab could be included.
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| Name | Affiliation | Role |
|---|---|---|
| Perrine BRUNELLE, MD | University Hospital, Lille | Principal Investigator |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| chu de Lille | Lille | France |
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| ID | Term |
|---|---|
| D004480 | Ectromelia |
| C537918 | Femur fibula ulna syndrome |
| ID | Term |
|---|---|
| D017880 | Limb Deformities, Congenital |
| D009139 | Musculoskeletal Abnormalities |
| D009140 | Musculoskeletal Diseases |
| D000013 | Congenital Abnormalities |
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| ID | Term |
|---|---|
| D000081122 | Epigenome |
| ID | Term |
|---|---|
| D016678 | Genome |
| D040342 | Genetic Structures |
| D055614 | Genetic Phenomena |
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| D009358 | Congenital, Hereditary, and Neonatal Diseases and Abnormalities |