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| Name | Class |
|---|---|
| Genome Institute of Singapore | OTHER |
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The objectives of this study are to examine the effects of ethnicity, central obesity and dietary components, on the human gut microbiome. The investigators hypothesize that these factors have an influence on the composition of the gut microbiome. Healthy subjects (n=35) provided stool samples for gut microbiome profiling using 16S rRNA sequencing and completed a dietary questionnaire. The serum samples were assayed for a panel of inflammatory cytokines. Their associations with central obesity were examined.
Introduction: Perturbance in the composition of human gut microbiota has been associated with metabolic disorders such as obesity, diabetes mellitus and insulin resistance. The objectives of this study are to examine the effects of ethnicity, central obesity and dietary components, on the human gut microbiome. The investigators hypothesize that these factors have an influence on the composition of the gut microbiome.
Methods: Subjects of Chinese (n=14), Malay (n=10) or Indian (n=11) ancestry, median age 39 (range:22-70 years old), were enrolled. The subjects provided stool samples for gut microbiome profiling using 16S rRNA sequencing and completed a dietary questionnaire. The serum samples were assayed for a panel of biomarkers (Interleukin-6, tumour necrosis factor alpha, adiponectin, cleaved cytokeratin 18, lipopolysaccharide binding protein and limulus amebocyte lysate). Central obesity was defined by waist circumference cut-offs in Asians.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Central obesity | Cases with central obesity as defined by waist circumference cut-offs ≥ 90 cm in men and ≥ 80 cm in women for Asians | ||
| No central obesity | Controls with no central obesity |
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| Measure | Description | Time Frame |
|---|---|---|
| Association of human gut microbiome profile with central obesity and dietary pattern | Species diversity as measured by diversity indices | 1 day |
| Measure | Description | Time Frame |
|---|---|---|
| Association of human gut microbiome profile with ethnicity | Species diversity as measured by diversity indices | 1 day |
| Association of interleukin-6 with central obesity and microbiota | Interleukin-6 concentration in pg/ml |
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Inclusion Criteria:
Exclusion Criteria:
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Healthy volunteers recruited through advertisement or patients with type 2 diabetes mellitus from hospital records.
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| Name | Affiliation | Role |
|---|---|---|
| John Chen Hsiang, MD, PhD | Changi General Hospital | Principal Investigator |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Changi General Hospital | Singapore | 529889 | Singapore |
| PubMed Identifier | Type | Citation | Retractions |
|---|---|---|---|
| 25371019 | Background | Hsiang JC, Bai WW, Raos Z, Stableforth W, Upton A, Selvaratnam S, Gane EJ, Gerred SJ. Epidemiology, disease burden and outcomes of cirrhosis in a large secondary care hospital in South Auckland, New Zealand. Intern Med J. 2015 Feb;45(2):160-9. doi: 10.1111/imj.12624. | |
| 30089174 | Background | Ho EXP, Cheung CMG, Sim S, Chu CW, Wilm A, Lin CB, Mathur R, Wong D, Chan CM, Bhagarva M, Laude A, Lim TH, Wong TY, Cheng CY, Davila S, Hibberd M. Human pharyngeal microbiota in age-related macular degeneration. PLoS One. 2018 Aug 8;13(8):e0201768. doi: 10.1371/journal.pone.0201768. eCollection 2018. |
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| ID | Term |
|---|---|
| D056128 | Obesity, Abdominal |
| D024821 | Metabolic Syndrome |
| ID | Term |
|---|---|
| D009765 | Obesity |
| D050177 | Overweight |
| D044343 | Overnutrition |
| D009748 | Nutrition Disorders |
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Microbial DNA from stool samples, genomic DNA from whole blood, and plasma samples from whole blood
| 1 day |
| Association of tumour necrosis factor - alpha with central obesity and microbiota | Tumour necrosis factor - alpha concentration in pg/ml | 1 day |
| Association of cleaved cytokeratin 18 with central obesity and microbiota | Cleaved cytokeratin 18 concentration in units/L | 1 day |
| Association of limulus amebocyte lysate with central obesity and microbiota | Limulus amebocyte lysate concentration in EU/ml | 1 day |
| Association of lipopolysaccharide binding protein with central obesity and microbiota | Lipopolysaccharide binding protein concentration in ng/ml | 1 day |
| Analysis of dietary components based on recommended daily allowance | Dietary questionnaire | 3 days |
| D009750 |
| Nutritional and Metabolic Diseases |
| D001835 | Body Weight |
| D012816 | Signs and Symptoms |
| D013568 | Pathological Conditions, Signs and Symptoms |
| D007333 | Insulin Resistance |
| D006946 | Hyperinsulinism |
| D044882 | Glucose Metabolism Disorders |
| D008659 | Metabolic Diseases |