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| ID | Type | Description | Link |
|---|---|---|---|
| NIRVANA | Other Identifier | Alias Study Number |
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This is a non-interventional multi-center with investigational sites in Chile and Brasil diagnostic study to validate novel diagnostic technologies, such as Next Generation Sequencing (NGS) from both tissue and blood compared to the current gold standard. As a non-interventional study, patients will receive the treatment indicated by their doctor independently of their participation on this study.
Many cancer cells look the same under the microscope. But as these cells are studied at the molecular level, some genetic alterations or defects that are more common to certain types of cancer are identified. In some cases, these defects are what make the cells grow and multiply abnormally.
Biomarkers are the molecular fingerprints of these genetic defects. By testing a sample of your tumor for biomarkers, doctors can learn if your cancer has one of these defects, and that may point to a specific treatment choice.
One of the genetic biomarkers that are believed to cause some cancers to grow is the ALK fusion gene. About 3% to 5% of people with NSCLC may test positive for ALK. ROS1 is a receptor found in 1 to 2% of people with this type of cancer.
The present study is designed to advance the molecular testing methodologies to identify ALK+ and ROS1+ NSCLC patients.
A positive correlation with these new technologies will mean an efficient, more accurate diagnostic test, which could impact a greater number of cancer patients around world.
B. Lung Cancer Non-small cell lung cancer (NSCLC) is a common cause of cancer mortality throughout the world. In 2007, there were 1.5 million new lung cancer cases diagnosed worldwide, including around 733,100 cases in the South American Region.6
Approximately 85% of lung cancer is histologically defined as non small cell and the remaining 14% as small cell. The majority of patients with NSCLC present with inoperable locally advanced (Stage IIIB) or metastatic (Stage IV) disease for which no curative treatment is yet available. In newly diagnosed patients with good performance status, platinum based doublet-combination chemotherapies are associated with a median overall survival (OS) of 7.4 to 9.9 months. 7, 8, 9, 10, 11, 12 Therefore, newer agents with novel mechanisms of action are still desperately needed for this serious life-threatening disease. 15,16
The rapid and efficient identification of key driver genes in non-small-cell lung cancer (NSCLC) is becoming increasingly important.17 Clinical screening efforts have revealed that the most common mutations in lung cancer specimens involve EGFR and KRAS, along with 10 other genes that show a prevalence of mutation in 5% or less of tumors. The ALK gene is rearranged in around 3%-5% of patients with NSCLC and has been the focus of intense basic and clinical research, suggesting that the frequency of the gene rearrangement is similar in Asian and Western patients.
ROS1 is a receptor tyrosine kinase of the insulin receptor family. Chromosomal rearrangements involving the ROS1 gene were originally described in glioblastomas, where ROS1 (chromosome 6q22) is fused to the FIG gene (chromosome 6q22 immediately adjacent to ROS1), 16 and have been shown to be transforming in transgenic mice.17 More recently, ROS1 fusions were identified as potential driver mutations in an NSCLC cell line (HCC78; SLC34A2-ROS1) and an NSCLC patient sample (CD74-ROS1). 18 These fusions led to constitutive kinase activity and were associated with sensitivity in vitro and in vivo to crizotinib. As of December 2013, 16 different variants have been found.16, 17, 18
The present study is designed to advance the molecular testing methodologies to identify ALK+ and ROS1+ NSCLC patients. Advanced next generation sequencing screening methodologies will be used to identify NSCLC patients whose tumors contain a ROS1 gene inversion or translocation or an ALK translocation.
A parallel test for ALK+ by either the Abbott ALK FISH test or the Ventana ALK IHC test is necessary to validate the NGS test in all samples. A parallel test for ROS1+ by either the Kreatech FISH test or the D4D6 ROS1 IHC test may be necessary to validate the NGS test in all samples.
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| Measure | Description | Time Frame |
|---|---|---|
| Number of Participants With Prevalence of Anaplastic Lymphoma Kinase (ALK) Biomarker | ALK status was measured by NGS- Oncomine focus assay (OFA) and Immuno histo chemistry (IHC) Ventana. Ventana -ALK and NGS-OFA were the assay procedures performed for ALK. The corresponding analysis of a specimen had 2 possible test results including ALK positive and ALK negative. True positives (tp) were defined as NGS-OFA and Ventana positive results, whereas false negatives (fn) were defined as NGS-OFA negative results and IHC-Ventana positive results. False positives (fp) were defined as NGS-OFA positive results and IHC-Ventana negative results. True negatives (tn) were defined as NGS-OFA and IHC Ventana negative results. | 40 months |
| Percentage of Concordance (Agreement) Between Ventana and NGS ALK Result | In this outcome measure, index of concordance with accuracy, sensitivity, specificity, positive predictive value and negative predictive value were measured. Accuracy (Acc): [tp+tn]/[tp+fp+fn+tn] *100; Sensitivity (Ss): tp/[tp+fn] *100; Specificity (Sp): tn/[fp+tn] *100; Positive Predictive Value (PPV): tp/[tp+fp] *100; Negative Predictive Value (NPV): tn/[fn+tn] *100. | 40 months |
| Measure | Description | Time Frame |
|---|---|---|
| Number of Participants With Prevalence of Anaplastic Lymphoma Kinase (ALK) Biomarker by Type of Participants | Participants were categorized on the basis of prospective and retrospective. Prospective participants were those participants whose samples were taken after the informed consent. Retrospective participants were those participants whose samples were taken before the date of signature of the informed consent. |
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Inclusion Criteria:
Exclusion Criteria:
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Lung cancer patients.
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| Name | Affiliation | Role |
|---|---|---|
| Pfizer CT.gov Call Center | Pfizer | Study Director |
| Ricardo Armisen, MD, PhD | CEMP Pfizer Chile | Study Chair |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Centro Regional Integrado de Oncologia | Fortaleza | Caera | 60336-550 | Brazil | ||
| Instituto Goiano de OncologÃa e Hematologia |
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| Label | URL |
|---|---|
| To obtain contact information for a study center near you, click here. | View source |
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Pfizer will provide access to individual de-identified participant data and related study documents (e.g. protocol, Statistical Analysis Plan (SAP), Clinical Study Report (CSR)) upon request from qualified researchers, and subject to certain criteria, conditions, and exceptions. Further details on Pfizer's data sharing criteria and process for requesting access can be found at: https://www.pfizer.com/science/clinical\_trials/trial\_data\_and\_results/data\_requests.
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| ID | Title | Description |
|---|---|---|
| FG000 | Non-Small Cell Lung Cancer Participants | Tissue and blood samples of participants with non-small cell lung cancer (NSCLC) were collected and analyzed to validate new molecular diagnostic technologies (such as Next Generation Sequencing [NGS]) and to compare their performance with the available standard tests. Participants were not treated or affected and only participated in the study for the initial samples and clinical parameters collection. |
| Title | Milestones | Reasons Not Completed | |||||
|---|---|---|---|---|---|---|---|
| Overall Study |
|
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| Type | Includes Protocol | Includes SAP | Includes ICF | Document Label | Document Date | Document Uploaded Date | Document File Name |
|---|---|---|---|---|---|---|---|
| Prot | Yes | No | No | Study Protocol | Apr 27, 2015 | Oct 18, 2019 |
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tumor tissue whole blood
| 40 months |
| Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Smoking (Tobacco Use) History | The categories of smoker (tobacco use) were as follows: Never Smoker: No smoking exposure, Current Smoker: Currently uses tobacco in either cigarette, cigar or similar method (tobacco chewers excluded), Former Smoker: Participant at one time smoked but then later quit. Smoking status unknown: Participant whose smoking status is unknown. | 40 months |
| Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Stage and Classification of Biopsy | Stage was defined at time of initial diagnosis of NSCLC and participants were staged according to the guidelines set by the NCCN version 7.2015. Participant's stage was categorized as: stage 0, stage IA, stage IB, stage IIA, stage IIB, stage IIIA, stage IIIB, and stage IV. Biopsy NSCLC class was categorized as adenocarcinoma, neuroendocrine tumors, other known type of NSCLC and squamous cell carcinoma. | 40 months |
| Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Location | Locations were categorized as lungs, pleura, node mediastinal and others. | 40 months |
| Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Gender and Age | In this outcome measure, participants were categorized according to their gender (female/male) and different age ranges (18-30 / 31-40 / 41-60 / 60 and above). | 40 months |
| Aparecida de Goiana |
| Goiás |
| 74915-520 |
| Brazil |
| Hospital Luxemburgo | Belo Horizonte | Minas Gerais | 30380-472 | Brazil |
| Hospital Felicio Rocho | Belo Horizonte /MG | Minas Gerais | 30110-934 | Brazil |
| Instituto de Cancer de Londrina | Londrina | Paraná | Brazil |
| Centro de Pesquisa da Universidade Federal de Sao Paulo - UNIFESP | São Paulo | VILA Clementino | 04024-002 | Brazil |
| Fundaçao Pio XII, Hospital do Cancer de Barretos | Barretos | Brazil |
| Liga Paranaense de Combate ao Cancer Hospital Erasto Gaetner | Curtiba-PR | Brazil |
| Hospital Sao Lucas da PUCRS | Porto Alegre | Brazil |
| Irmandade da Santa Casa de Misericordia de Porto Alegre (ISCMPA) - Hospital Santa Rita | Porto Alegre | Brazil |
| Instituto de Medicina Integral Prof. Fernando Figueira - IMIP | Recife | Brazil |
| Instituto COI de Pesquisa Educacao e Gestao | Rio de Janeiro | 22793-080 | Brazil |
| Hospital Da Bahia | Salvador | 41820-011 | Brazil |
| Hospital Santa Izabel | Salvador | Brazil |
| Nucleo de Oncologia da Bahia | Salvador | Brazil |
| Instituto de Oncologia de Sorocaba - ONCO Clinicas Especializadas SC Ltda | São Paulo | 18035-300 | Brazil |
| A.C. Camargo Cancer Center | São Paulo | Brazil |
| Fundacao Faculdade Regional de Medicina de Sao Jose do Rio Preto | São Paulo | Brazil |
| Hospital Israelita Albert Einstein | São Paulo/SP | 05651-901 | Brazil |
| Hospital Base de Puerto Montt | Port Montt | Los Lagos Region | 5506667 | Chile |
| Hospital Base de Valdivia | Valdivia | Los Lagos Region | 5090145 | Chile |
| Instituto Clinico Oncologico del Sur (ICOS) | Temuco | Ranco | 4810469 | Chile |
| Centro Internacional de Estudios Clinicos | Santiago | RM | 8420383 | Chile |
| Hospital Clinico Universidad de Chile, Seccion de Oncologia | Independencia | Santiago, RM | 8380456 | Chile |
| Hospital Base de Arica | Arica | Chile |
| Hosp Regional de Concepcion | Concepción | Chile |
| Universidad Católica del Norte | Coquimbo | Chile |
| Instituto Nacional Del Torax | Santiago | Chile |
| Hospital Carlos Alberto Seguin Escobedo | Arequipa | Peru |
| Hospital Nacional Hipolito Unanue | El Agustino | Peru |
| Clinica San Felipe | Lima | 11 | Peru |
| Hospital Central de la Fuerza Aerea Peruana | Lima | 18 | Peru |
| Instituto Nacional de Enfermedales Neoplasicas (INEN) | Lima | 34 | Peru |
| Oncosalud | Lima | 41 | Peru |
| Unidad de Investigacion de la Clinica Internacional - Sede San Borja | Lima | 41 | Peru |
| ClÃnica Quirurgica Santa Maria | Lima | Peru |
| Centro de Investigación ClÃnica Trujillo E.I.R.L. | Trujillo | 13001 | Peru |
| COMPLETED |
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| NOT COMPLETED |
|
Full analysis set included all NSCLC participants who satisfied all inclusion and exclusion criteria.
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| ID | Title | Description |
|---|---|---|
| BG000 | Non-Small Cell Lung Cancer Participants | Tissue and blood samples of participants with NSCLC were collected and analyzed to validate new molecular diagnostic technologies (such as NGS) and to compare their performance with the available standard tests. Participants were not treated or affected and only participated in the study for the initial samples and clinical parameters collection. |
| Units | Counts |
|---|---|
| Participants |
|
| Title | Description | Population Description | Parameter Type | Dispersion Type | Unit of Measure | Calculate Percentage | Denominator Units Selected | Denominators | Classes | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Age, Continuous | Mean | Standard Deviation | years |
| |||||||||||||||||
| Sex: Female, Male | Count of Participants | Participants |
| ||||||||||||||||||
| Race/Ethnicity, Customized | Count of Participants | Participants |
|
| Type | Title | Description | Population Description | Reporting Status | Anticipated Posting Date | Parameter Type | Dispersion Type | Unit of Measure | Calculate Percentage | Time Frame | Units Analyzed | Denominator Units Selected | Arm/Group Information | Denominators | Classes | Analyses | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Primary | Number of Participants With Prevalence of Anaplastic Lymphoma Kinase (ALK) Biomarker | ALK status was measured by NGS- Oncomine focus assay (OFA) and Immuno histo chemistry (IHC) Ventana. Ventana -ALK and NGS-OFA were the assay procedures performed for ALK. The corresponding analysis of a specimen had 2 possible test results including ALK positive and ALK negative. True positives (tp) were defined as NGS-OFA and Ventana positive results, whereas false negatives (fn) were defined as NGS-OFA negative results and IHC-Ventana positive results. False positives (fp) were defined as NGS-OFA positive results and IHC-Ventana negative results. True negatives (tn) were defined as NGS-OFA and IHC Ventana negative results. | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. | Posted | Count of Participants | Participants | 40 months |
|
|
| ||||||||||||||||||||||||||||||
| Primary | Percentage of Concordance (Agreement) Between Ventana and NGS ALK Result | In this outcome measure, index of concordance with accuracy, sensitivity, specificity, positive predictive value and negative predictive value were measured. Accuracy (Acc): [tp+tn]/[tp+fp+fn+tn] *100; Sensitivity (Ss): tp/[tp+fn] *100; Specificity (Sp): tn/[fp+tn] *100; Positive Predictive Value (PPV): tp/[tp+fp] *100; Negative Predictive Value (NPV): tn/[fn+tn] *100. | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. Here, "Number analyzed" signifies the number of participants evaluable at specific rows. | Posted | Number | 95% Confidence Interval | percentage of concordance | 40 months |
|
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| Secondary | Number of Participants With Prevalence of Anaplastic Lymphoma Kinase (ALK) Biomarker by Type of Participants | Participants were categorized on the basis of prospective and retrospective. Prospective participants were those participants whose samples were taken after the informed consent. Retrospective participants were those participants whose samples were taken before the date of signature of the informed consent. | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. Here, "Overall Number of Participants Analyzed" participants evaluable for this outcome measure. | Posted | Count of Participants | Participants | 40 months |
|
| |||||||||||||||||||||||||||||||
| Secondary | Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Smoking (Tobacco Use) History | The categories of smoker (tobacco use) were as follows: Never Smoker: No smoking exposure, Current Smoker: Currently uses tobacco in either cigarette, cigar or similar method (tobacco chewers excluded), Former Smoker: Participant at one time smoked but then later quit. Smoking status unknown: Participant whose smoking status is unknown. | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. Here, "Overall Number of Participants Analyzed" participants evaluable for this outcome measure. | Posted | Count of Participants | Participants | 40 months |
|
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| Secondary | Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Stage and Classification of Biopsy | Stage was defined at time of initial diagnosis of NSCLC and participants were staged according to the guidelines set by the NCCN version 7.2015. Participant's stage was categorized as: stage 0, stage IA, stage IB, stage IIA, stage IIB, stage IIIA, stage IIIB, and stage IV. Biopsy NSCLC class was categorized as adenocarcinoma, neuroendocrine tumors, other known type of NSCLC and squamous cell carcinoma. | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. Here, "Overall Number of Participants Analyzed" participants evaluable for this outcome measure. | Posted | Count of Participants | Participants | 40 months |
|
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| Secondary | Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Location | Locations were categorized as lungs, pleura, node mediastinal and others. | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. Here, "Overall Number of Participants Analyzed" participants evaluable for this outcome measure. | Posted | Count of Participants | Participants | 40 months |
|
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| Secondary | Number of Participants With Association of Anaplastic Lymphoma Kinase (ALK) Rearrangement by Gender and Age | In this outcome measure, participants were categorized according to their gender (female/male) and different age ranges (18-30 / 31-40 / 41-60 / 60 and above). | Per protocol analysis set included all participants with valid IHC-Ventana and NGS-OFA results. Here, "Overall Number of Participants Analyzed" participants evaluable for this outcome measure. | Posted | Count of Participants | Participants | 40 months |
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Up to 40 months
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| ID | Title | Description | Deaths (Affected) | Deaths (At Risk) | Serious Events (Affected) | Serious Events (At Risk) | Other Events (Affected) | Other Events (At Risk) |
|---|---|---|---|---|---|---|---|---|
| EG000 | Non-Small Cell Lung Cancer Participants | Tissue and blood samples of participants with NSCLC were collected and analyzed to validate new molecular diagnostic technologies (such as NGS) and to compare their performance with the available standard tests. Participants were not treated or affected and only participated in the study for the initial samples and clinical parameters collection. | 0 | 4,240 | 0 | 4,240 | 0 | 4,240 |
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Pfizer has the right to review disclosures, requesting a delay of less than 60 days. Investigator will postpone single center publications until after disclosure of pooled data (all sites), less than 12 months from study completion/termination at all participating sites. Investigator may not disclose previously undisclosed confidential information other than study results.
| Title | Organization | Phone | Extension | |
|---|---|---|---|---|
| Pfizer ClinicalTrials.gov Call Center | Pfizer Inc. | 1-800-718-1021 | ClinicalTrials.gov_Inquiries@pfizer.com |
| Prot_000.pdf |
| SAP | No | Yes | No | Statistical Analysis Plan | Sep 25, 2019 | Oct 18, 2019 | SAP_001.pdf |
| ID | Term |
|---|---|
| D008175 | Lung Neoplasms |
| ID | Term |
|---|---|
| D012142 | Respiratory Tract Neoplasms |
| D013899 | Thoracic Neoplasms |
| D009371 | Neoplasms by Site |
| D009369 | Neoplasms |
| D008171 | Lung Diseases |
| D012140 | Respiratory Tract Diseases |
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| Caucasian |
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| More than one race |
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| Native Indian |
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| Other |
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| ALK-false negative |
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