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The purpose of this study is to seeking a molecular signature of pathological radiation induced fibrosis based on the response of skin fibroblasts after irradiation, comparing two groups of patients distinguished by their individual radiosensitivity. The signature will integrate recent insights in terms of alternative splicing of mRNAs and level of expression of non-coding RNAs, particularly long non-coding RNAs, snRNAs, snoRNAs and microRNAs. In each group each expression patterns of candidate HSP proteins potentially predictive of pathological radiation induced fibrosis (HSP27, HSP70, αβ crystalline) in the serum and on cell culture will be characterized.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Biomarkers | Experimental |
|
| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| skin biopsies | Other | Biopsies (12 G) will be performed :
|
|
| Measure | Description | Time Frame |
|---|---|---|
| Global mRNA alternative splicing and expression of non-coding RNAs profiles in healthy dermal fibroblasts | frequency of inclusion of individual exons within the set of mRNA isoforms (overall splicing profile) and variation in expression of non-coding RNAs | 6 months |
| Measure | Description | Time Frame |
|---|---|---|
| Transcriptomic signature of pathological induced fibrosis when comparing the primary outcome between the two populations on cultured fibroblasts | 6 months | |
| Transcriptomic signature of pathological induced fibrosis when comparing the primary outcome between the two populations on serum |
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Inclusion Criteria:
Then stratification into two groups :
group 1 : radio-sensitive patients
group 2 : radio-tolerant (control) patients
Exclusion Criteria:
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| Name | Affiliation | Role |
|---|---|---|
| VOGIN GUILLAUME, MD, PhD | Institut de Cancérologie de Lorraine | Principal Investigator |
| BEHM-ANSMANT Isabelle, PhD | UMR 7365 CNRS-Université de Lorraine, IMoPA | Principal Investigator |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Institut de Cancérologie de Lorraine | Vandœuvre-lès-Nancy | 54519 | France |
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| ID | Term |
|---|---|
| D001943 | Breast Neoplasms |
| D005355 | Fibrosis |
| ID | Term |
|---|---|
| D009371 | Neoplasms by Site |
| D009369 | Neoplasms |
| D001941 | Breast Diseases |
| D012871 | Skin Diseases |
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| ID | Term |
|---|---|
| D001800 | Blood Specimen Collection |
| ID | Term |
|---|---|
| D013048 | Specimen Handling |
| D019411 | Clinical Laboratory Techniques |
| D019937 | Diagnostic Techniques and Procedures |
| D003933 | Diagnosis |
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| blood samples | Other | blood samples are collected:
|
|
| 6 months |
| Individual radiosensitivity on healthy dermal fibroblasts | The micronuclei will be counted 24 hours after ex vivo irradiation with an indirect immunofluorescence assay (53BP1 + pATM antibodies) | 6 months |
| Comparison of the overall mRNA splicing and non-coding RNA expression profiles between non irradiated and irradiated dermal fibroblasts in the same individual | 6 months |
| Changes in cellular distribution of the main non-coding RNAs whose expression varies significantly within the pre-identified signature between the 2 groups of patients | The cellular distribution is defined as the compartment (nucleoplasm, nucleolus, intra-nuclear corpuscles, cytosol, RE, mitochondria ...) marked by the fluorescent probe labeled to the non-coding RNAs of interest (RNA-FISH) | 6 months |
| seric HSP proteins potentially predictive of pathological induced fibrosis | HSP27, HSP70 and αB crystalline measured in serum with ELISA assay | 6 months |
| Cellular distribution of specific HSP on fibroblast culture in each group of patients | immunolabeling of HSPs and spatial mapping and sub-nuclear distributions | 6 months |
| Potential interactions between DNA damage response proteins and candidate HSP | Collocation of HSPs with pATM and 53-BP1 (confocal microscopy / FLIM) | 6 months |
| D017437 |
| Skin and Connective Tissue Diseases |
| D010335 | Pathologic Processes |
| D013568 | Pathological Conditions, Signs and Symptoms |
| D011677 | Punctures |
| D013514 | Surgical Procedures, Operative |
| D008919 | Investigative Techniques |