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The goal of this project is to characterize the genetic profile of patients with advanced stage IIIB/IV non-small cell lung cancer (NSCLC) using liquid biopsies
Lung cancers are the first cause of death by cancer in the world. The majority of these patients are diagnosed at a late stage, non-eligible to a curative treatment. Due to tumoral genomic identification, it has been possible to classify NSCLC in molecular subtypes according to molecular abnormalities detection called "drivers" which can be targeted using an appropriate treatment. This change modifies the standard treatments from the very first line of treatment particularly for patients having an EGFR mutation or an ALK or ROS1 rearrangement, with a significant benefit of progression free survival. The French NCI (INCa) recommends to identify genomic alterations of a genes panel including EGFR, KRAS, BRAF, HER2, ALK and ROS1 as well as mutations in MET exon 14. However, all the patients who benefit from a targeted therapy develop resistance after a mean duration of 10-12 months after starting the treatment. In case of progression, the tumour genetic analysis through new biopsies, enables to identify these mechanisms and then to determine if the patient can benefit or not from a third generation molecule active on these mechanisms, and to have a better understanding of the disease evolution.
The detection of these alterations is routinely performed using tissular biopsies but in 10 to 20% of the cases, it is not possible.
The detection of these molecular abnormalities in the plasma, called " liquid biopsy " is a valuable non-invasive complementary approach for these patients. It is presently used in routine for detecting the EGFR mutations at diagnosis as well as for searching EGFR T790M mutation for resistant patients.
The liquid biopsies enable to detect circulating tumoral DNA.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| Cohort 1 | Patients with advanced NSCLC and no druggable molecular alteration at time of diagnosis | ||
| Cohort 2 | Patients with advanced NSCLC harboring targetable molecular alterations at time of diagnosis | ||
| Cohort 3 | Patients with advanced NSCLC at time of immunotherapy introduction (1st or 2nd line) |
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| Measure | Description | Time Frame |
|---|---|---|
| Identification of the genetic profile in advanced or metastatic NSCLC patients using liquid biopsies (circulating tumoral DNA) | Technique: ddPCR + targeted NGF, whole exome sequencing | 5 years |
| Measure | Description | Time Frame |
|---|---|---|
| Identification of genetic biomarkers (or molecular profiles) having a potential predictive value in the treatments response | Techniques: ddPCR + targeted NGF, whole exome sequencing | 5 years |
| Detection of the ALK and ROS1 genes translocations in the circulating DNA |
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COHORT 1
Inclusion Criteria:
Exclusion Criteria:
- Patients treated before their liquid biopsy
COHORT 2 Inclusion criteria
COHORT 3 Inclusion criteria
Exclusion criteria
- Initiation of immunotherpy before their liquid biopsy
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Patients with advanced NSCLC
| Name | Role | Phone | Extension | |
|---|---|---|---|---|
| Pierre Saintigny, MD, PhD | Contact | pierre.saintigny@lyon.unicancer.fr |
| Name | Affiliation | Role |
|---|---|---|
| Pierre Saintigny, MD, PhD | pierre.saintigny@lyon.unicancer.fr | Study Director |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| Centre Hospitalier Annecy Genevois | Active, not recruiting | Annecy | France | |||
| CH Fleyriat |
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| ID | Term |
|---|---|
| D002289 | Carcinoma, Non-Small-Cell Lung |
| ID | Term |
|---|---|
| D002283 | Carcinoma, Bronchogenic |
| D001984 | Bronchial Neoplasms |
| D008175 | Lung Neoplasms |
| D012142 | Respiratory Tract Neoplasms |
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Blood samples
Techniques: ddPCR + targeted NGF, whole exome sequencing |
| 5 years |
| Evaluation of the liquid biopsies role in the tumoral monitoring | Correlation between mutated allelic fractions or expression's modification with the treatment response. Techniques: ddPCR + targeted NGF, whole exome sequencing | 5 years |
| Evaluation of genomic and transcriptomic factors detectable in the plasma, associated to the immunotherapy response | Correlation between transcriptomic and genomic factors and response to immunotherapy. Techniques: ddPCR + targeted NGF, whole exome sequencing | 5 years |
| Evaluation of the spatial and temporal tumor heterogeneity under targeted therapy treatment | Techniques: ddPCR + targeted NGF, whole exome sequencing | 5 years |
| Evaluation of the miRNAs' expression in plasma as an epigenetic factor associated to treatments response | Correlation between miRNAS expression in plasma and treatment's efficacy. Techniques: miRNAs profiling using HTG technology | 5 years |
| Circulating tumoral cells isolation and analysis to determine the role of non-genomic and/or phenotypic factors in the treatments response. | Single cell isolation technology | 5 years |
| Evaluation of the resistance mechanisms to targeted therapies | Technique: ddPCR + targeted NGF, whole exome sequencing | 5 years |
| Active, not recruiting |
| Bourg-en-Bresse |
| France |
| Hôpital Louis Pradel | Active, not recruiting | Bron | 69677 | France |
| CHU Grenoble Alpes | Active, not recruiting | Grenoble | France |
| Centre Léon Bérard | Recruiting | Lyon | 69008 | France |
|
| CHRU de Saint-Etienne | Active, not recruiting | Saint-Priest-en-Jarez | 42270 | France |
| Institut de Cancérologie Lucien Neuwirth | Active, not recruiting | Saint-Priest-en-Jarez | 42270 | France |
| Hôpital Nord Ouest | Active, not recruiting | Villefranche-sur-Saône | 69655 | France |
| D013899 |
| Thoracic Neoplasms |
| D009371 | Neoplasms by Site |
| D009369 | Neoplasms |
| D008171 | Lung Diseases |
| D012140 | Respiratory Tract Diseases |