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The purpose of this study is to verify the discriminatory value of previously identified salivary transcriptome and proteome markers for oral squamous cell cancer in an intended use population of patients with oral lesions suspicious for cancer.
Saliva samples are collected from patients before clinically driven oral biopsy for lesions suspicious for cancer. Specimens are processed by laboratory personnel blinded to the tissue diagnosis. Six pre-specified mRNA markers (IL1b, IL8, SAT, DUSP1, OAZ1 and S100P) are measured by polymerase chain reaction. Markers are compared in cancer and control by raw Ct values as well as by delta Ct after adjustment for housekeeping gens. Appropriate housekeeping genes are identified in a random subset of cancer and control patients and then verified in the remaining subjects. Predictive models are generated by a pre-specified method and robustness evaluated by bootstrap analysis. The model is then further validated in a second cohort. Three pre-specified protein markers (IL8, IL1B, and M2BP) are a secondary endpoint and will also be compared in cancer and control patients.
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| Label | Type | Description | Intervention Names |
|---|---|---|---|
| oral lesions | oral lesions suspicious for squamous cell carcinoma with saliva collection prior to clinically driven oral biopsy |
|
| Name | Type | Description | Arm Group Labels | Other Names |
|---|---|---|---|---|
| saliva collection prior to clinically driven oral biopsy | Other | cell free saliva to be used to measure mRNA and proteins by PCR and ELISA |
|
| Measure | Description | Time Frame |
|---|---|---|
| Test specificity at 90% sensitivity | Based on multimarker test score | at study completion as well as after model development following enrollment of the first 30 patents with cancer |
| Measure | Description | Time Frame |
|---|---|---|
| Validation of individual mRNA and protein markers | Based on comparison of cancer and controls | After enrollment of 30 patients with cancer |
| Validation of a pre-specified multi marker model | Based on combined sensitivity and specificity |
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Inclusion Criteria:
Exclusion Criteria:
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patients with oral lesions suspicious for squamous cell cancer and scheduled for clinically driven biopsy
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| Name | Affiliation | Role |
|---|---|---|
| Jack L Martin, MD | PeriRx, LLC | Principal Investigator |
| Marc Surkin, MD | Main Line Health System | Study Chair |
| Facility | Status | City | State | ZIP | Country | Contacts |
|---|---|---|---|---|---|---|
| University of Illinois at Chicago | Withdrawn | Chicago | Illinois | 60612 | United States | |
| PubMed Identifier | Type | Citation | Retractions |
|---|---|---|---|
| 27411053 | Derived | Martin JL. Validation of Reference Genes for Oral Cancer Detection Panels in a Prospective Blinded Cohort. PLoS One. 2016 Jul 13;11(7):e0158462. doi: 10.1371/journal.pone.0158462. eCollection 2016. |
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| ID | Term |
|---|---|
| D000077195 | Squamous Cell Carcinoma of Head and Neck |
| ID | Term |
|---|---|
| D002294 | Carcinoma, Squamous Cell |
| D002277 | Carcinoma |
| D009375 | Neoplasms, Glandular and Epithelial |
| D009370 | Neoplasms by Histologic Type |
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cell free saliva
| After enrollment of 30 patients with cancer |
| University of Michigan |
| Terminated |
| Ann Arbor |
| Michigan |
| 48109 |
| United States |
| Department of Surgery, Michigan Sate University | Terminated | East Lansing | Michigan | 48912 | United States |
| St. John Providence Health System | Recruiting | Warren | Michigan | 48092 | United States |
|
| Main Line Health System | Recruiting | Wynnewood | Pennsylvania | 19096 | United States |
|
| D009369 | Neoplasms |
| D006258 | Head and Neck Neoplasms |
| D009371 | Neoplasms by Site |